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celaref - Single-cell RNAseq cell cluster labelling by reference
After the clustering step of a single-cell RNAseq experiment, this package aims to suggest labels/cell types for the clusters, on the basis of similarity to a reference dataset. It requires a table of read counts per cell per gene, and a list of the cells belonging to each of the clusters, (for both test and reference data).
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singlecell
4.00 score 10 scripts 552 downloadscelarefData - Processed scRNA data for celaref Vignette - cell labelling by reference
This experiment data contains some processed data used in the celaref package vignette. These are publically available datasets, that have been processed by celaref package, and can be manipulated further with it.
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experimentdatasinglecelldataexperimenthubdatapkg
3.30 score